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NH3 molecule

Summary Information

N-H bond distance = 1.01779 Å

H-N-H bond angle = 105.757°

Molecule name: NH3

Calculation method: RB3LYP

Basis set: 6-31G(d,p)

Final energy E(RB3LYP): -56.55776866 a.u.

Point group: C3V


Convergence

Item table:

         Item               Value     Threshold  Converged?
 Maximum Force            0.000137     0.000450     YES
 RMS     Force            0.000090     0.000300     YES
 Maximum Displacement     0.000352     0.001800     YES
 RMS     Displacement     0.000189     0.001200     YES

File:RINO IIDA NH3 OPT.LOG

NH3


Vibration frequencies

Questions:

1. How many modes do you expect from the 3N-6 rule?

6 modes


2. Which modes are degenerate (i.e. have the same energy)?

2 and 3 are degenerate.

5 and 6 are degenerate.


3. Which modes are "bending" vibrations and which are "bond stretch" vibrations?

1, 2 and 3 are bending, 4, 5, and 6 are stretching.


4. Which mode is highly symmetric?

Mode 4, and 5 and 6


5. One mode is known as the "umbrella" mode, which one is this?

Mode 1


6. How many bands would you expect to see in an experimental spectrum of gaseous ammonia?

2 bands


Atomic charges

Atomic charges: -1.125 on N, +0.375 on Hs. This agrees with expectation because the electronegativity of nitrogen is greater than hydrogen, so there should be a larger electron cloud around nitrogen.


Independent work: Comparison against literature values

Literature value

N-H bond distance = 1.0124 Å [1]

H-N-H bond angle = 106.670° [1]


Computer generated values

N-H bond distance = 1.01779 Å

Error = (1.01779-1.0124)/1.0124 = 0.005323982... = 0.5% (1 s.f.)

H-N-H bond angle = 105.757°

Error = (105.757-106.670)/106.670 = -0.008559107...

Taking the absolute value of this gives:

Error = 0.9% (1 s.f.)

N2 molecule

Summary information

N-N bond distance = 1.10550 Å

Molecule name: N2

Calculation method: RB3LYP

Basis set: 6-31G(d,p)

Final energy E(RB3LYP): -109.52412868 a.u.

Point group: D*H


Convergence

Item table:

         Item               Value     Threshold  Converged?
 Maximum Force            0.000001     0.000450     YES
 RMS     Force            0.000001     0.000300     YES
 Maximum Displacement     0.000000     0.001800     YES
 RMS     Displacement     0.000000     0.001200     YES


File:RINO IIDA N2 OPT.LOG

N2


Vibration frequencies


Atomic charges

N2 consists of two nitrogen atoms, and there is no difference in electronegativity. Therefore, the N-N bond in the nitrogen molecule is 100% covalent and there are no charges.

H2 molecule

Summary information

H-H bond distance = 0.74279 Å

Molecule name: H2

Calculation method: RB3LYP

Basis set: 6-31G(d,p)

Final energy E(RB3LYP): -1.17853936 a.u.

Point group: D*H


Convergence

Item table:

         Item               Value     Threshold  Converged?
 Maximum Force            0.000000     0.000450     YES
 RMS     Force            0.000000     0.000300     YES
 Maximum Displacement     0.000000     0.001800     YES
 RMS     Displacement     0.000001     0.001200     YES

File:RINO IIDA H2 OPT.LOG

H2


Vibration frequencies


Atomic charges

H2 consists of two hydrogen atoms, and there is no difference in electronegativity. Therefore, the H-H bond in the hydrogen molecule is 100% covalent and there are no charges.


Energy calculation

E(NH3)= -56.55776866 a.u.

2*E(NH3)= -113.11553732 a.u.

E(N2)= -109.52412868 a.u.

E(H2)= -1.17853936 a.u.

3*E(H2)= -3.53561808 a.u.

ΔE=2*E(NH3)-[E(N2)+3*E(H2)]= -0.05579062 a.u.

ΔE= -146.4782... = -146.49 kJ/mol

Since the energy change is negative, the ammonia product is more energetically stable than the gaseous reactants.


Project molecule: O2

Summary Information

O-O bond distance = 1.21602 Å

Molecule name: O2

Calculation method: RB3LYP

Basis set: 6-31G(d,p)

Final energy E(RB3LYP): -150.25742434 a.u.

Point group: D*H


Convergence

Item table:

         Item               Value     Threshold  Converged?
 Maximum Force            0.000130     0.000450     YES
 RMS     Force            0.000130     0.000300     YES
 Maximum Displacement     0.000080     0.001800     YES
 RMS     Displacement     0.000113     0.001200     YES


File:RINO IIDA O2 OPT.LOG

O2


Vibration frequencies


Atomic charges

O2 consists of two oxygen atoms, and there is no difference in electronegativity. Therefore, the O-O bond in the oxygen molecule is 100% covalent and there are no charges.


Molecular orbitals

MO1

Two s orbitals from oxygen atoms contribute to this molecular orbital. This is an occupied bonding orbital that is lower in energy than the original s orbitals.


MO2

Two s orbitals from oxygen atoms contribute to this molecular orbital. This is an occupied anti-bonding orbital that is higher in energy than the original s orbitals.


MO3

This is an occupied anti-bonding orbital that is formed by the axial overlap of two p orbitals and the resultant molecular orbital is higher in energy than the original p orbitals.


MO4

This is an occupied bonding orbital that is formed by the parallel overlap of the two p orbitals and the resultant molecular orbital is lower in energy than the original p orbitals.


MO5

This is an unoccupied anti-bonding orbital that is formed by the parallel overlap of the two p orbitals and the resultant molecular orbital is lower in energy than the original p orbitals. This is the LUMO of O2.

References

  1. 1.0 1.1 National Institute of Standards and Technology. (2016) Experimental data for NH3. Available from https://cccbdb.nist.gov/exp2x.asp?casno=7664417 [Accessed 1 March 2018]