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Rep:Mod:lem215

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Part 1

Optimised NH3

Molecule: Optimised NH3
Calculation method: RB3LYP
Base set: 6-31G(d.p)
Final energy E(RB3LYP) in atomic units (au): -56.55776873
RMS gradient: 0.00000485
Point group: C3V
Optimized NH bond distance: 1.01798 A
Optimized bond angle: 105.741 
Item               Value     Threshold  Converged?
 Maximum Force            0.000004     0.000450     YES
 RMS     Force            0.000004     0.000300     YES
 Maximum Displacement     0.000070     0.001800     YES
 RMS     Displacement     0.000033     0.001200     YES
 Predicted change in Energy=-5.785188D-10
 Optimization completed.
    -- Stationary point found.
                           ----------------------------
                           !   Optimized Parameters   !
                           ! (Angstroms and Degrees)  !
 --------------------------                            --------------------------
 ! Name  Definition              Value          Derivative Info.                !
 --------------------------------------------------------------------------------
 ! R1    R(1,2)                  1.018          -DE/DX =    0.0                 !
 ! R2    R(1,3)                  1.018          -DE/DX =    0.0                 !
 ! R3    R(1,4)                  1.018          -DE/DX =    0.0                 !
 ! A1    A(2,1,3)              105.7412         -DE/DX =    0.0                 !
 ! A2    A(2,1,4)              105.7412         -DE/DX =    0.0                 !
 ! A3    A(3,1,4)              105.7412         -DE/DX =    0.0                 !
 ! D1    D(2,1,4,3)           -111.8571         -DE/DX =    0.0                 !
 --------------------------------------------------------------------------------
 GradGradGradGradGradGradGradGradGradGradGradGradGradGradGradGradGradGrad


NH3 Optimized

The optimisation file is liked to here

Displayed vibrations of an optimised NH3 molecule.
How many modes do you expect from the 3N-6 rule?
Three modes.
Which modes are degenerate (ie have the same energy)?
Modes 2 and 3.
Which modes are "bending" vibrations and which are "bond stretch" vibrations?
Bending vibrations: 1,2,3.
Bond stretch vibrations: 4,5,6.
Which mode is highly symmetric?
Mode 4.
One mode is known as the "umbrella" mode, which one is this?
Mode 1.
How many bands would you expect to see in an experimental spectrum of gaseous ammonia?
4 different bands.

Charge on the N-atom: -1.125
Charge on the H-atoms: 0.375
Nitrogen is more electronegative than hydrogen so you would expect nitrogen to have a more negative atomic charge than hydrogen.

Optimised N2

Molecule: Optimised N2
Calculation method: RB3LYP
Base set: 6-31G(d.p)
Final energy E(RB3LYP) in atomic units (au): -109.52412868
RMS gradient: 0.00000060 a.u.
Point group: D*H
Optimized NH bond distance: 1.10550 A
Optimized bond angle: 180.0 
 Item               Value     Threshold  Converged?
 Maximum Force            0.000001     0.000450     YES
 RMS     Force            0.000001     0.000300     YES
 Maximum Displacement     0.000000     0.001800     YES
 RMS     Displacement     0.000000     0.001200     YES
 Predicted change in Energy=-3.383792D-13
 Optimization completed.
    -- Stationary point found.
                           ----------------------------
                           !   Optimized Parameters   !
                           ! (Angstroms and Degrees)  !
 --------------------------                            --------------------------
 ! Name  Definition              Value          Derivative Info.                !
 --------------------------------------------------------------------------------
 ! R1    R(1,2)                  1.1055         -DE/DX =    0.0                 !
 --------------------------------------------------------------------------------
 GradGradGradGradGradGradGradGradGradGradGradGradGradGradGradGradGradGrad
N2 Optimized

The optimisation file is liked to here

Displayed vibrations of an optimised N2 molecule.

Optimised H2

Molecule: Optimised H2
Calculation method: RB3LYP
Base set: 6-31G(d.p)
Final energy E(RB3LYP) in atomic units (au): -1.17853936
RMS gradient: 0.00000017 a.u.
Point group: D*H
Optimized HH bond distance: 0.74279 A
Optimized bond angle: 180.0 
 Item               Value     Threshold  Converged?
 Maximum Force            0.000000     0.000450     YES
 RMS     Force            0.000000     0.000300     YES
 Maximum Displacement     0.000000     0.001800     YES
 RMS     Displacement     0.000001     0.001200     YES
 Predicted change in Energy=-1.167770D-13
 Optimization completed.
    -- Stationary point found.
                           ----------------------------
                           !   Optimized Parameters   !
                           ! (Angstroms and Degrees)  !
 --------------------------                            --------------------------
 ! Name  Definition              Value          Derivative Info.                !
 --------------------------------------------------------------------------------
 ! R1    R(1,2)                  0.7428         -DE/DX =    0.0                 !
 --------------------------------------------------------------------------------
 GradGradGradGradGradGradGradGradGradGradGradGradGradGradGradGradGradGrad
H2 Optimized

The optimisation file is liked to here

Displayed vibrations of an optimised H2 molecule.

Energy for the reaction of N2 + 3H2 -> 2NH3

E(NH3)= -56.55776873
2*E(NH3)= -113.11553746
E(N2)= -109.52412868
E(H2)= -1.17853936
3*E(H2)= -3.53561808
ΔE=2*E(NH3)-[E(N2)+3*E(H2)]= -113.11553746 - (-109.52412868+-3.53561808)= -0.0557907 a.u.
ΔE=-146.47849401 KJ/mol

The ammonia products are more stable than the gaseous reactants

Part 2: Independently chosen small molecule, HCl.

Molecule: Optimised HCl
Calculation method: RB3LYP
Base set: 6-31G(d.p)
Final energy E(RB3LYP) in atomic units (au): -460.80077875
RMS gradient: 0.00005211 a.u.
Point group: C*V
Optimized HCl bond distance: 1.28599 A
Optimized bond angle: 180.0
Item               Value     Threshold  Converged?
 Maximum Force            0.000090     0.000450     YES
 RMS     Force            0.000090     0.000300     YES
 Maximum Displacement     0.000139     0.001800     YES
 RMS     Displacement     0.000197     0.001200     YES
 Predicted change in Energy=-1.270754D-08
 Optimization completed.
    -- Stationary point found.
                           ----------------------------
                           !   Optimized Parameters   !
                           ! (Angstroms and Degrees)  !
 --------------------------                            --------------------------
 ! Name  Definition              Value          Derivative Info.                !
 --------------------------------------------------------------------------------
 ! R1    R(1,2)                  1.286          -DE/DX =    0.0001              !
 --------------------------------------------------------------------------------
 GradGradGradGradGradGradGradGradGradGradGradGradGradGradGradGradGradGrad
HCl Optimized

The optimisation file is liked to here

Displayed vibrations of an optimised HCl molecule.
How many modes do you expect from the 3N-5 (linear) rule?
One mode so you would expect HCl to produce one peak in its infrared spectrum. The vibrational mode of HCl is a stretching vibration and therefore highly symmetric.
Atomic charges:
H-atom - 0.284
Cl-atom - -0.284
This is as expected because chlorine is more electronegative than hydrogen.
Displayed atomic charges in the HCl molecule.

Reaction Energy

H2(g) + Cl2(g) = 2HCl(g)
E(H2)=-1.17853936 
0.5*E(H2)=-0.58926968	
E(Cl2)=-920.34987886
0.5*E(Cl2)=-460.17493943
E(HCl)=-460.80077875
ΔE=(HCl)-[0.5*E(H2)+0.5*E(Cl2)]=-460.80077875-[-0.58926968+-460.17493943]=-0.03656964 a.u.
ΔE=-96.013492114 KJ/mol
Literature value of ΔE=-92.3 KJ/mol [1]

Molecular Orbitals

Sigma nb molecular orbital.
This non-bonding molecular orbital (occupied) is generated by electrons from the Cl 3s orbital and it is deep in energy, -0.84773.
Sigma 3pz molecular orbital.
 This bonding molecular orbital (occupied) is the HOMO and it is generated by AO mixing from a H 1s electron and a Cl 3p electron and it is deep in energy, -0.47433.
Pi nb molecular orbital.
Pi nb molecular orbital.
 These two non-bonding molecular orbitals (occupied) are generated by electrons from the Cl 3p orbitals. Both of these MOs are degenerate and have energy -0.33163.
Sigma* 3pz molecular orbital.
 This antibonding molecular orbital is the LUMO and it is generated by AO mixing from a H 1s and a Cl 3p orbtial. It is unoccupied and high in energy, 0.01366. 

References

[1] - Course In Chemistry Iit Jee. 2011. Print.