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NH3 molecule

Molecule: NH3

Calculation method: RB3LYP

Basis set: 6-31G(d,p)

Final energy E(RB3LYP): -56.55776873 au

RMS Gradient: 0.00000485

Point group of NH3: C3V

Optimised N-H bond distance: 1.01798 angstroms

Optimised H-N-H bond angle: 105.741 degrees

        Item               Value     Threshold  Converged?
 Maximum Force            0.000004     0.000450     YES
 RMS     Force            0.000004     0.000300     YES
 Maximum Displacement     0.000072     0.001800     YES
 RMS     Displacement     0.000035     0.001200     YES
 Predicted change in Energy=-5.986283D-10
 Optimization completed.
    -- Stationary point found.
                           ----------------------------
                           !   Optimized Parameters   !
                           ! (Angstroms and Degrees)  !
 --------------------------                            --------------------------
 ! Name  Definition              Value          Derivative Info.                !
 --------------------------------------------------------------------------------
 ! R1    R(1,2)                  1.018          -DE/DX =    0.0                 !
 ! R2    R(1,3)                  1.018          -DE/DX =    0.0                 !
 ! R3    R(1,4)                  1.018          -DE/DX =    0.0                 !
 ! A1    A(2,1,3)              105.7412         -DE/DX =    0.0                 !
 ! A2    A(2,1,4)              105.7412         -DE/DX =    0.0                 !
 ! A3    A(3,1,4)              105.7412         -DE/DX =    0.0                 !
 ! D1    D(2,1,4,3)           -111.8571         -DE/DX =    0.0                 !
 --------------------------------------------------------------------------------
 GradGradGradGradGradGradGradGradGradGradGradGradGradGradGradGradGradGrad


Ammonia Molecule

The optimisation file is liked to here

There are no negative frequencies

How many modes would you expect from the 3N-6 rule? 6

Which modes are degenerate? Modes 2 and 3, 5 and 6

Which modes are 'bending' vibrations and which are 'bond stretch vibrations? Bending: 1, 2, 3

Bond stretch: 4, 5, 6

Which mode is highly symmetric? 1

One mode is known as the 'umbrella' mode, which one is it? 1

How many bands would you expect to see in an experimental spectrum of gaseous ammonia? 3 as these are the only ones which are IR active as they have a change in the dipole moment


Charge on N atom: -1.125

Charge on H atoms: 0.375 on each one

Nitrogen is more electronegative than hydrogen so it bears the negative charge


N2

SUMMARY INFORMATION

What is the molecule? N2

What is the calculation method? RB3LYP

What is the basis set? 6-31G(d,p)

What is the final energy E(RB3LYP)? -109.52412868 au

What is the RMS gradient? 0.00000060 au

What is the point group of the molecule? D*H


         Item               Value     Threshold  Converged?
 Maximum Force            0.000001     0.000450     YES
 RMS     Force            0.000001     0.000300     YES
 Maximum Displacement     0.000000     0.001800     YES
 RMS     Displacement     0.000000     0.001200     YES
 Predicted change in Energy=-3.401103D-13
 Optimization completed.
    -- Stationary point found.
                           ----------------------------
                           !   Optimized Parameters   !
                           ! (Angstroms and Degrees)  !
 --------------------------                            --------------------------
 ! Name  Definition              Value          Derivative Info.                !
 --------------------------------------------------------------------------------
 ! R1    R(1,2)                  1.1055         -DE/DX =    0.0                 !
 --------------------------------------------------------------------------------
 GradGradGradGradGradGradGradGradGradGradGradGradGradGradGradGradGradGrad

There are no negative frequencies


The optimisation file is liked to here

H2

SUMMARY INFORMATION

What is the molecule? H2

What is the calculation method? RB3LYP

What is the basis set? 6-31G(d,p)

What is the final energy E(RB3LYP)? -1.17853936 au

What is the RMS gradient? 0.00000017 au

What is the point group of the molecule? D*H


                 Item               Value     Threshold  Converged?
 Maximum Force            0.000000     0.000450     YES
 RMS     Force            0.000000     0.000300     YES
 Maximum Displacement     0.000000     0.001800     YES
 RMS     Displacement     0.000001     0.001200     YES
 Predicted change in Energy=-1.164080D-13
 Optimization completed.
    -- Stationary point found.
                           ----------------------------
                           !   Optimized Parameters   !
                           ! (Angstroms and Degrees)  !
 --------------------------                            --------------------------
 ! Name  Definition              Value          Derivative Info.                !
 --------------------------------------------------------------------------------
 ! R1    R(1,2)                  0.7428         -DE/DX =    0.0                 !
 --------------------------------------------------------------------------------
 GradGradGradGradGradGradGradGradGradGradGradGradGradGradGradGradGradGrad

There are no negative frequencies

The optimisation file is liked to here

Energies in atomic units

E(NH3)= -56.55776873

2*E(NH3)= -113.11553750

E(N2)= -109.52412868

E(H2)= -1.17853936

3*E(H2)= -3.53561808

ΔE=2*E(NH3)-[E(N2)+3*E(H2)]= -0.05579074 au

ΔE= -146.48 kJ/mol

The ammonia is more stable than the gaseous reactants


N2 + 3 H2 ⇌ 2 NH3

The standard enthalpy change of the Haber process is found to be -45.8 kJ/mol. [1]



This reaction is an equilibrium reaction where the optimum temperature is 300oC. As the temperature where the reaction happens increases above 300oC, KP decreases meaning that the equilibrium shifts to the left and less ammonia is produced.[1]

  1. Brown, Theodore L.; LeMay, H. Eugene, Jr; Bursten, Bruce E (2006). "Table 15.2". Chemistry: The Central Science (10th ed.). Upper Saddle River, NJ: Pearson. ISBN 0-13-109686-9.

F2 molecule

Summary Information

What is the molecule? F2

What is the calculation method? RB3LYP

What is the basis set? 6-31G(d,p)

What is the final energy E(RB3LYP)? -199.49825218 au

What is the RMS gradient? 0.00007365 au

What is the point group of the molecule? D*H


F2 Optimisation Plot

 
         Item               Value     Threshold  Converged?
 Maximum Force            0.000128     0.000450     YES
 RMS     Force            0.000128     0.000300     YES
 Maximum Displacement     0.000156     0.001800     YES
 RMS     Displacement     0.000221     0.001200     YES

The optimisation file is liked to here


Fluorine Molecule


Vibrations

F2 is not IR active since it is a linear molecule with no change in dipole


Charges

There are no charges in the molecule since the atoms are identical and hence have identical electronegativity and sharing of the electrons is equal


Molecular Orbitals

The atomic orbitals that contribute to the molecular orbitals are the 1s, 2s, and 2p for each of the fluorine atoms, as each fluorine atom has an electronic configuration of: 1s22s22p5.

The molecular orbitals in the fluorine molecule are a mixture of bonding and antibonding orbitals

The molecular orbitals are very low in energy, especially the 1s bonding and the 1s antibonding with -24.79 au. As we move to the 2s orbitals their energy is much higher (-1.34 au).

The molecular orbitals are occupied since they have electrons in them

Image 1: 2s bonding orbital in F2


Image 2: 2s anto-bonding orbital in F2


Image 3: 2p bonding orbital forming a sigma bond in F2


Image 4: 2p bonding orbital forming a pi bond in F2


Image 5: 2p anti-bonding orbital in F2