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	<id>https://chemwiki.ch.ic.ac.uk/api.php?action=feedcontributions&amp;feedformat=atom&amp;user=Wh1413</id>
	<title>ChemWiki - User contributions [en]</title>
	<link rel="self" type="application/atom+xml" href="https://chemwiki.ch.ic.ac.uk/api.php?action=feedcontributions&amp;feedformat=atom&amp;user=Wh1413"/>
	<link rel="alternate" type="text/html" href="https://chemwiki.ch.ic.ac.uk/wiki/Special:Contributions/Wh1413"/>
	<updated>2026-05-15T19:42:13Z</updated>
	<subtitle>User contributions</subtitle>
	<generator>MediaWiki 1.43.0</generator>
	<entry>
		<id>https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557985</id>
		<title>Functionalisation of Carbon Nanotube Sidewalls by Cycloaddition Reactions:Computationally Investigating ONIOM Method Combinations</title>
		<link rel="alternate" type="text/html" href="https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557985"/>
		<updated>2016-06-07T09:54:40Z</updated>

		<summary type="html">&lt;p&gt;Wh1413: /* ONIOM(B3LYP/6-31G*:B3LYP/STO-3G) */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;=Diels-Alder Cycloaddition of Quinodimethane to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 quino TS.gif.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the Diels-Alder&amp;lt;br/&amp;gt;cycloaddition of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at -539.76 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the Diels-Alder&amp;lt;br/&amp;gt;cycloaddition of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=1,3-dipolar Cycloaddition of Ozone to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS a.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT at the C1-C2 bond, calculated&amp;lt;br/&amp;gt;using ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the 1,3-dipolar&amp;lt;br/&amp;gt;cycloaddition of ozone to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at -303.67 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS d.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT at the C2-C3 bond, calculated&amp;lt;br/&amp;gt;using ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the 1,3-dipolar&amp;lt;br/&amp;gt;cycloaddition of ozone to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at -386.92 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=[2+1]-Cycloaddition of Dichlorocarbene to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene aPM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 carbene TS.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of dichlorocarbene to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at -389.60 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene s aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of dichlorocarbene to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=[4+2]-Cycloaddition of Benzyne to (10,0)-SWCNT=&lt;br /&gt;
==Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:B3LYP/STO-3G)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:Benz TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Benz42 TS B31.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 TS benz.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the [4+2]-cycloaddition&amp;lt;br/&amp;gt;of benzyne to (10,0)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:B3LYP/STO-3G). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the [4+2]-cycloaddition&amp;lt;br/&amp;gt;of benzyne to (10,0)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:B3LYP/STO-3G).&lt;br /&gt;
|Single imaginary frequency at 223.19 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:B3LYP/STO-3G)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:Benz prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Benz42 prod B31.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the [4+2]-cycloaddition&amp;lt;br/&amp;gt;of benzyne to (10,0)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:B3LYP/STO-3G). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the [4+2]-cycloaddition&amp;lt;br/&amp;gt;of benzyne to (10,0)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:B3LYP/STO-3G).&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;/div&gt;</summary>
		<author><name>Wh1413</name></author>
	</entry>
	<entry>
		<id>https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557984</id>
		<title>Functionalisation of Carbon Nanotube Sidewalls by Cycloaddition Reactions:Computationally Investigating ONIOM Method Combinations</title>
		<link rel="alternate" type="text/html" href="https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557984"/>
		<updated>2016-06-07T09:53:56Z</updated>

		<summary type="html">&lt;p&gt;Wh1413: /* ONIOM(B3LYP/6-31G*:PM3) */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;=Diels-Alder Cycloaddition of Quinodimethane to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 quino TS.gif.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the Diels-Alder&amp;lt;br/&amp;gt;cycloaddition of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at -539.76 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the Diels-Alder&amp;lt;br/&amp;gt;cycloaddition of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=1,3-dipolar Cycloaddition of Ozone to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS a.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT at the C1-C2 bond, calculated&amp;lt;br/&amp;gt;using ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the 1,3-dipolar&amp;lt;br/&amp;gt;cycloaddition of ozone to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at -303.67 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS d.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT at the C2-C3 bond, calculated&amp;lt;br/&amp;gt;using ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the 1,3-dipolar&amp;lt;br/&amp;gt;cycloaddition of ozone to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at -386.92 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=[2+1]-Cycloaddition of Dichlorocarbene to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene aPM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 carbene TS.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of dichlorocarbene to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at -389.60 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene s aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of dichlorocarbene to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=[4+2]-Cycloaddition of Benzyne to (10,0)-SWCNT=&lt;br /&gt;
==Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:B3LYP/STO-3G)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:Benz TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Benz42 TS B31.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 TS benz.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the [4+2]-cycloaddition&amp;lt;br/&amp;gt;of benzyne to (10,0)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:B3LYP/STO-3G). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the [4+2]-cycloaddition&amp;lt;br/&amp;gt;of benzyne to (10,0)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:B3LYP/STO-3G).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:B3LYP/STO-3G)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:Benz prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Benz42 prod B31.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the [4+2]-cycloaddition&amp;lt;br/&amp;gt;of benzyne to (10,0)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:B3LYP/STO-3G). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the [4+2]-cycloaddition&amp;lt;br/&amp;gt;of benzyne to (10,0)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:B3LYP/STO-3G).&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;/div&gt;</summary>
		<author><name>Wh1413</name></author>
	</entry>
	<entry>
		<id>https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557983</id>
		<title>Functionalisation of Carbon Nanotube Sidewalls by Cycloaddition Reactions:Computationally Investigating ONIOM Method Combinations</title>
		<link rel="alternate" type="text/html" href="https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557983"/>
		<updated>2016-06-07T09:53:13Z</updated>

		<summary type="html">&lt;p&gt;Wh1413: /* ONIOM(B3LYP/6-31G*:PM3) */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;=Diels-Alder Cycloaddition of Quinodimethane to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 quino TS.gif.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the Diels-Alder&amp;lt;br/&amp;gt;cycloaddition of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at -539.76 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the Diels-Alder&amp;lt;br/&amp;gt;cycloaddition of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=1,3-dipolar Cycloaddition of Ozone to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS a.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT at the C1-C2 bond, calculated&amp;lt;br/&amp;gt;using ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the 1,3-dipolar&amp;lt;br/&amp;gt;cycloaddition of ozone to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at -303.67 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS d.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT at the C2-C3 bond, calculated&amp;lt;br/&amp;gt;using ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the 1,3-dipolar&amp;lt;br/&amp;gt;cycloaddition of ozone to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at -386.92 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=[2+1]-Cycloaddition of Dichlorocarbene to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene aPM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 carbene TS.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of dichlorocarbene to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene s aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of dichlorocarbene to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=[4+2]-Cycloaddition of Benzyne to (10,0)-SWCNT=&lt;br /&gt;
==Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:B3LYP/STO-3G)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:Benz TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Benz42 TS B31.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 TS benz.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the [4+2]-cycloaddition&amp;lt;br/&amp;gt;of benzyne to (10,0)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:B3LYP/STO-3G). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the [4+2]-cycloaddition&amp;lt;br/&amp;gt;of benzyne to (10,0)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:B3LYP/STO-3G).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:B3LYP/STO-3G)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:Benz prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Benz42 prod B31.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the [4+2]-cycloaddition&amp;lt;br/&amp;gt;of benzyne to (10,0)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:B3LYP/STO-3G). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the [4+2]-cycloaddition&amp;lt;br/&amp;gt;of benzyne to (10,0)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:B3LYP/STO-3G).&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;/div&gt;</summary>
		<author><name>Wh1413</name></author>
	</entry>
	<entry>
		<id>https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557982</id>
		<title>Functionalisation of Carbon Nanotube Sidewalls by Cycloaddition Reactions:Computationally Investigating ONIOM Method Combinations</title>
		<link rel="alternate" type="text/html" href="https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557982"/>
		<updated>2016-06-07T09:52:43Z</updated>

		<summary type="html">&lt;p&gt;Wh1413: /* ONIOM(B3LYP/6-31G*:PM3) */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;=Diels-Alder Cycloaddition of Quinodimethane to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 quino TS.gif.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the Diels-Alder&amp;lt;br/&amp;gt;cycloaddition of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at -539.76 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the Diels-Alder&amp;lt;br/&amp;gt;cycloaddition of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=1,3-dipolar Cycloaddition of Ozone to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS a.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT at the C1-C2 bond, calculated&amp;lt;br/&amp;gt;using ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the 1,3-dipolar&amp;lt;br/&amp;gt;cycloaddition of ozone to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at -303.67 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS d.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT at the C2-C3 bond, calculated&amp;lt;br/&amp;gt;using ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the 1,3-dipolar&amp;lt;br/&amp;gt;cycloaddition of ozone to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=[2+1]-Cycloaddition of Dichlorocarbene to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene aPM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 carbene TS.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of dichlorocarbene to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene s aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of dichlorocarbene to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=[4+2]-Cycloaddition of Benzyne to (10,0)-SWCNT=&lt;br /&gt;
==Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:B3LYP/STO-3G)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:Benz TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Benz42 TS B31.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 TS benz.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the [4+2]-cycloaddition&amp;lt;br/&amp;gt;of benzyne to (10,0)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:B3LYP/STO-3G). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the [4+2]-cycloaddition&amp;lt;br/&amp;gt;of benzyne to (10,0)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:B3LYP/STO-3G).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:B3LYP/STO-3G)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:Benz prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Benz42 prod B31.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the [4+2]-cycloaddition&amp;lt;br/&amp;gt;of benzyne to (10,0)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:B3LYP/STO-3G). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the [4+2]-cycloaddition&amp;lt;br/&amp;gt;of benzyne to (10,0)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:B3LYP/STO-3G).&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;/div&gt;</summary>
		<author><name>Wh1413</name></author>
	</entry>
	<entry>
		<id>https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557981</id>
		<title>Functionalisation of Carbon Nanotube Sidewalls by Cycloaddition Reactions:Computationally Investigating ONIOM Method Combinations</title>
		<link rel="alternate" type="text/html" href="https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557981"/>
		<updated>2016-06-07T09:52:03Z</updated>

		<summary type="html">&lt;p&gt;Wh1413: /* ONIOM(B3LYP/6-31G*:PM3) */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;=Diels-Alder Cycloaddition of Quinodimethane to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 quino TS.gif.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the Diels-Alder&amp;lt;br/&amp;gt;cycloaddition of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at -539.76 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the Diels-Alder&amp;lt;br/&amp;gt;cycloaddition of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=1,3-dipolar Cycloaddition of Ozone to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS a.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT at the C1-C2 bond, calculated&amp;lt;br/&amp;gt;using ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the 1,3-dipolar&amp;lt;br/&amp;gt;cycloaddition of ozone to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS d.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT at the C2-C3 bond, calculated&amp;lt;br/&amp;gt;using ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the 1,3-dipolar&amp;lt;br/&amp;gt;cycloaddition of ozone to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=[2+1]-Cycloaddition of Dichlorocarbene to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene aPM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 carbene TS.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of dichlorocarbene to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene s aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of dichlorocarbene to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=[4+2]-Cycloaddition of Benzyne to (10,0)-SWCNT=&lt;br /&gt;
==Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:B3LYP/STO-3G)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:Benz TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Benz42 TS B31.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 TS benz.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the [4+2]-cycloaddition&amp;lt;br/&amp;gt;of benzyne to (10,0)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:B3LYP/STO-3G). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the [4+2]-cycloaddition&amp;lt;br/&amp;gt;of benzyne to (10,0)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:B3LYP/STO-3G).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:B3LYP/STO-3G)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:Benz prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Benz42 prod B31.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the [4+2]-cycloaddition&amp;lt;br/&amp;gt;of benzyne to (10,0)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:B3LYP/STO-3G). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the [4+2]-cycloaddition&amp;lt;br/&amp;gt;of benzyne to (10,0)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:B3LYP/STO-3G).&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;/div&gt;</summary>
		<author><name>Wh1413</name></author>
	</entry>
	<entry>
		<id>https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557980</id>
		<title>Functionalisation of Carbon Nanotube Sidewalls by Cycloaddition Reactions:Computationally Investigating ONIOM Method Combinations</title>
		<link rel="alternate" type="text/html" href="https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557980"/>
		<updated>2016-06-07T09:51:15Z</updated>

		<summary type="html">&lt;p&gt;Wh1413: /* ONIOM(B3LYP/6-31G*:B3LYP/STO-3G) */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;=Diels-Alder Cycloaddition of Quinodimethane to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 quino TS.gif.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the Diels-Alder&amp;lt;br/&amp;gt;cycloaddition of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the Diels-Alder&amp;lt;br/&amp;gt;cycloaddition of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=1,3-dipolar Cycloaddition of Ozone to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS a.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT at the C1-C2 bond, calculated&amp;lt;br/&amp;gt;using ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the 1,3-dipolar&amp;lt;br/&amp;gt;cycloaddition of ozone to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS d.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT at the C2-C3 bond, calculated&amp;lt;br/&amp;gt;using ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the 1,3-dipolar&amp;lt;br/&amp;gt;cycloaddition of ozone to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=[2+1]-Cycloaddition of Dichlorocarbene to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene aPM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 carbene TS.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of dichlorocarbene to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene s aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of dichlorocarbene to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=[4+2]-Cycloaddition of Benzyne to (10,0)-SWCNT=&lt;br /&gt;
==Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:B3LYP/STO-3G)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:Benz TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Benz42 TS B31.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 TS benz.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the [4+2]-cycloaddition&amp;lt;br/&amp;gt;of benzyne to (10,0)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:B3LYP/STO-3G). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the [4+2]-cycloaddition&amp;lt;br/&amp;gt;of benzyne to (10,0)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:B3LYP/STO-3G).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:B3LYP/STO-3G)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:Benz prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Benz42 prod B31.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the [4+2]-cycloaddition&amp;lt;br/&amp;gt;of benzyne to (10,0)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:B3LYP/STO-3G). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the [4+2]-cycloaddition&amp;lt;br/&amp;gt;of benzyne to (10,0)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:B3LYP/STO-3G).&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;/div&gt;</summary>
		<author><name>Wh1413</name></author>
	</entry>
	<entry>
		<id>https://chemwiki.ch.ic.ac.uk/index.php?title=File:Benz_prod.png&amp;diff=557979</id>
		<title>File:Benz prod.png</title>
		<link rel="alternate" type="text/html" href="https://chemwiki.ch.ic.ac.uk/index.php?title=File:Benz_prod.png&amp;diff=557979"/>
		<updated>2016-06-07T09:50:53Z</updated>

		<summary type="html">&lt;p&gt;Wh1413: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;&lt;/div&gt;</summary>
		<author><name>Wh1413</name></author>
	</entry>
	<entry>
		<id>https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557978</id>
		<title>Functionalisation of Carbon Nanotube Sidewalls by Cycloaddition Reactions:Computationally Investigating ONIOM Method Combinations</title>
		<link rel="alternate" type="text/html" href="https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557978"/>
		<updated>2016-06-07T09:47:53Z</updated>

		<summary type="html">&lt;p&gt;Wh1413: /* ONIOM(B3LYP/6-31G*:B3LYP/STO-3G) */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;=Diels-Alder Cycloaddition of Quinodimethane to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 quino TS.gif.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the Diels-Alder&amp;lt;br/&amp;gt;cycloaddition of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the Diels-Alder&amp;lt;br/&amp;gt;cycloaddition of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=1,3-dipolar Cycloaddition of Ozone to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS a.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT at the C1-C2 bond, calculated&amp;lt;br/&amp;gt;using ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the 1,3-dipolar&amp;lt;br/&amp;gt;cycloaddition of ozone to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS d.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT at the C2-C3 bond, calculated&amp;lt;br/&amp;gt;using ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the 1,3-dipolar&amp;lt;br/&amp;gt;cycloaddition of ozone to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=[2+1]-Cycloaddition of Dichlorocarbene to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene aPM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 carbene TS.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of dichlorocarbene to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene s aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of dichlorocarbene to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=[4+2]-Cycloaddition of Benzyne to (10,0)-SWCNT=&lt;br /&gt;
==Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:B3LYP/STO-3G)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:Benz TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Benz42 TS B31.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 TS benz.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the [4+2]-cycloaddition&amp;lt;br/&amp;gt;of benzyne to (10,0)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:B3LYP/STO-3G). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the [4+2]-cycloaddition&amp;lt;br/&amp;gt;of benzyne to (10,0)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:B3LYP/STO-3G).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:B3LYP/STO-3G)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Benz42 prod B31.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the [4+2]-cycloaddition&amp;lt;br/&amp;gt;of benzyne to (10,0)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:B3LYP/STO-3G). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the [4+2]-cycloaddition&amp;lt;br/&amp;gt;of benzyne to (10,0)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:B3LYP/STO-3G).&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;/div&gt;</summary>
		<author><name>Wh1413</name></author>
	</entry>
	<entry>
		<id>https://chemwiki.ch.ic.ac.uk/index.php?title=File:Benz42_prod_B31.pdb&amp;diff=557977</id>
		<title>File:Benz42 prod B31.pdb</title>
		<link rel="alternate" type="text/html" href="https://chemwiki.ch.ic.ac.uk/index.php?title=File:Benz42_prod_B31.pdb&amp;diff=557977"/>
		<updated>2016-06-07T09:47:35Z</updated>

		<summary type="html">&lt;p&gt;Wh1413: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;&lt;/div&gt;</summary>
		<author><name>Wh1413</name></author>
	</entry>
	<entry>
		<id>https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557976</id>
		<title>Functionalisation of Carbon Nanotube Sidewalls by Cycloaddition Reactions:Computationally Investigating ONIOM Method Combinations</title>
		<link rel="alternate" type="text/html" href="https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557976"/>
		<updated>2016-06-07T09:46:23Z</updated>

		<summary type="html">&lt;p&gt;Wh1413: /* ONIOM(B3LYP/6-31G*:B3LYP/STO-3G) */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;=Diels-Alder Cycloaddition of Quinodimethane to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 quino TS.gif.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the Diels-Alder&amp;lt;br/&amp;gt;cycloaddition of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the Diels-Alder&amp;lt;br/&amp;gt;cycloaddition of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=1,3-dipolar Cycloaddition of Ozone to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS a.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT at the C1-C2 bond, calculated&amp;lt;br/&amp;gt;using ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the 1,3-dipolar&amp;lt;br/&amp;gt;cycloaddition of ozone to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS d.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT at the C2-C3 bond, calculated&amp;lt;br/&amp;gt;using ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the 1,3-dipolar&amp;lt;br/&amp;gt;cycloaddition of ozone to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=[2+1]-Cycloaddition of Dichlorocarbene to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene aPM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 carbene TS.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of dichlorocarbene to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene s aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of dichlorocarbene to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=[4+2]-Cycloaddition of Benzyne to (10,0)-SWCNT=&lt;br /&gt;
==Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:B3LYP/STO-3G)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:Benz TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Benz42 TS B31.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 TS benz.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the [4+2]-cycloaddition&amp;lt;br/&amp;gt;of benzyne to (10,0)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:B3LYP/STO-3G). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the [4+2]-cycloaddition&amp;lt;br/&amp;gt;of benzyne to (10,0)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:B3LYP/STO-3G).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:B3LYP/STO-3G)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene s aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the [4+2]-cycloaddition&amp;lt;br/&amp;gt;of benzyne to (10,0)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:B3LYP/STO-3G). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the [4+2]-cycloaddition&amp;lt;br/&amp;gt;of benzyne to (10,0)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:B3LYP/STO-3G).&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;/div&gt;</summary>
		<author><name>Wh1413</name></author>
	</entry>
	<entry>
		<id>https://chemwiki.ch.ic.ac.uk/index.php?title=File:Benz_TS.png&amp;diff=557975</id>
		<title>File:Benz TS.png</title>
		<link rel="alternate" type="text/html" href="https://chemwiki.ch.ic.ac.uk/index.php?title=File:Benz_TS.png&amp;diff=557975"/>
		<updated>2016-06-07T09:45:58Z</updated>

		<summary type="html">&lt;p&gt;Wh1413: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;&lt;/div&gt;</summary>
		<author><name>Wh1413</name></author>
	</entry>
	<entry>
		<id>https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557974</id>
		<title>Functionalisation of Carbon Nanotube Sidewalls by Cycloaddition Reactions:Computationally Investigating ONIOM Method Combinations</title>
		<link rel="alternate" type="text/html" href="https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557974"/>
		<updated>2016-06-07T09:42:02Z</updated>

		<summary type="html">&lt;p&gt;Wh1413: /* ONIOM(B3LYP/6-31G*:B3LYP/STO-3G) */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;=Diels-Alder Cycloaddition of Quinodimethane to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 quino TS.gif.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the Diels-Alder&amp;lt;br/&amp;gt;cycloaddition of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the Diels-Alder&amp;lt;br/&amp;gt;cycloaddition of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=1,3-dipolar Cycloaddition of Ozone to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS a.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT at the C1-C2 bond, calculated&amp;lt;br/&amp;gt;using ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the 1,3-dipolar&amp;lt;br/&amp;gt;cycloaddition of ozone to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS d.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT at the C2-C3 bond, calculated&amp;lt;br/&amp;gt;using ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the 1,3-dipolar&amp;lt;br/&amp;gt;cycloaddition of ozone to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=[2+1]-Cycloaddition of Dichlorocarbene to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene aPM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 carbene TS.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of dichlorocarbene to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene s aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of dichlorocarbene to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=[4+2]-Cycloaddition of Benzyne to (10,0)-SWCNT=&lt;br /&gt;
==Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:B3LYP/STO-3G)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Benz42 TS B31.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 TS benz.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the [4+2]-cycloaddition&amp;lt;br/&amp;gt;of benzyne to (10,0)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:B3LYP/STO-3G). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the [4+2]-cycloaddition&amp;lt;br/&amp;gt;of benzyne to (10,0)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:B3LYP/STO-3G).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:B3LYP/STO-3G)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene s aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the [4+2]-cycloaddition&amp;lt;br/&amp;gt;of benzyne to (10,0)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:B3LYP/STO-3G). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the [4+2]-cycloaddition&amp;lt;br/&amp;gt;of benzyne to (10,0)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:B3LYP/STO-3G).&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;/div&gt;</summary>
		<author><name>Wh1413</name></author>
	</entry>
	<entry>
		<id>https://chemwiki.ch.ic.ac.uk/index.php?title=File:Benz42_TS_B31.pdb&amp;diff=557973</id>
		<title>File:Benz42 TS B31.pdb</title>
		<link rel="alternate" type="text/html" href="https://chemwiki.ch.ic.ac.uk/index.php?title=File:Benz42_TS_B31.pdb&amp;diff=557973"/>
		<updated>2016-06-07T09:41:42Z</updated>

		<summary type="html">&lt;p&gt;Wh1413: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;&lt;/div&gt;</summary>
		<author><name>Wh1413</name></author>
	</entry>
	<entry>
		<id>https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557972</id>
		<title>Functionalisation of Carbon Nanotube Sidewalls by Cycloaddition Reactions:Computationally Investigating ONIOM Method Combinations</title>
		<link rel="alternate" type="text/html" href="https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557972"/>
		<updated>2016-06-07T09:40:56Z</updated>

		<summary type="html">&lt;p&gt;Wh1413: /* ONIOM(B3LYP/6-31G*:B3LYP/STO-3G) */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;=Diels-Alder Cycloaddition of Quinodimethane to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 quino TS.gif.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the Diels-Alder&amp;lt;br/&amp;gt;cycloaddition of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the Diels-Alder&amp;lt;br/&amp;gt;cycloaddition of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=1,3-dipolar Cycloaddition of Ozone to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS a.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT at the C1-C2 bond, calculated&amp;lt;br/&amp;gt;using ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the 1,3-dipolar&amp;lt;br/&amp;gt;cycloaddition of ozone to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS d.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT at the C2-C3 bond, calculated&amp;lt;br/&amp;gt;using ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the 1,3-dipolar&amp;lt;br/&amp;gt;cycloaddition of ozone to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=[2+1]-Cycloaddition of Dichlorocarbene to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene aPM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 carbene TS.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of dichlorocarbene to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene s aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of dichlorocarbene to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=[4+2]-Cycloaddition of Benzyne to (10,0)-SWCNT=&lt;br /&gt;
==Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:B3LYP/STO-3G)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene aPM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 TS benz.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the [4+2]-cycloaddition&amp;lt;br/&amp;gt;of benzyne to (10,0)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:B3LYP/STO-3G). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the [4+2]-cycloaddition&amp;lt;br/&amp;gt;of benzyne to (10,0)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:B3LYP/STO-3G).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:B3LYP/STO-3G)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene s aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the [4+2]-cycloaddition&amp;lt;br/&amp;gt;of benzyne to (10,0)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:B3LYP/STO-3G). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the [4+2]-cycloaddition&amp;lt;br/&amp;gt;of benzyne to (10,0)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:B3LYP/STO-3G).&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;/div&gt;</summary>
		<author><name>Wh1413</name></author>
	</entry>
	<entry>
		<id>https://chemwiki.ch.ic.ac.uk/index.php?title=File:PM3_TS_benz.gif&amp;diff=557971</id>
		<title>File:PM3 TS benz.gif</title>
		<link rel="alternate" type="text/html" href="https://chemwiki.ch.ic.ac.uk/index.php?title=File:PM3_TS_benz.gif&amp;diff=557971"/>
		<updated>2016-06-07T09:40:13Z</updated>

		<summary type="html">&lt;p&gt;Wh1413: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;&lt;/div&gt;</summary>
		<author><name>Wh1413</name></author>
	</entry>
	<entry>
		<id>https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557970</id>
		<title>Functionalisation of Carbon Nanotube Sidewalls by Cycloaddition Reactions:Computationally Investigating ONIOM Method Combinations</title>
		<link rel="alternate" type="text/html" href="https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557970"/>
		<updated>2016-06-07T09:38:23Z</updated>

		<summary type="html">&lt;p&gt;Wh1413: /* ONIOM(B3LYP/6-31G*:B3LYP/STO-3G) */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;=Diels-Alder Cycloaddition of Quinodimethane to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 quino TS.gif.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the Diels-Alder&amp;lt;br/&amp;gt;cycloaddition of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the Diels-Alder&amp;lt;br/&amp;gt;cycloaddition of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=1,3-dipolar Cycloaddition of Ozone to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS a.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT at the C1-C2 bond, calculated&amp;lt;br/&amp;gt;using ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the 1,3-dipolar&amp;lt;br/&amp;gt;cycloaddition of ozone to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS d.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT at the C2-C3 bond, calculated&amp;lt;br/&amp;gt;using ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the 1,3-dipolar&amp;lt;br/&amp;gt;cycloaddition of ozone to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=[2+1]-Cycloaddition of Dichlorocarbene to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene aPM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 carbene TS.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of dichlorocarbene to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene s aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of dichlorocarbene to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=[4+2]-Cycloaddition of Benzyne to (10,0)-SWCNT=&lt;br /&gt;
==Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:B3LYP/STO-3G)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene aPM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 carbene TS.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the [4+2]-cycloaddition&amp;lt;br/&amp;gt;of benzyne to (10,0)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:B3LYP/STO-3G). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the [4+2]-cycloaddition&amp;lt;br/&amp;gt;of benzyne to (10,0)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:B3LYP/STO-3G).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:B3LYP/STO-3G)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene s aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the [4+2]-cycloaddition&amp;lt;br/&amp;gt;of benzyne to (10,0)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:B3LYP/STO-3G). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the [4+2]-cycloaddition&amp;lt;br/&amp;gt;of benzyne to (10,0)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:B3LYP/STO-3G).&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;/div&gt;</summary>
		<author><name>Wh1413</name></author>
	</entry>
	<entry>
		<id>https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557969</id>
		<title>Functionalisation of Carbon Nanotube Sidewalls by Cycloaddition Reactions:Computationally Investigating ONIOM Method Combinations</title>
		<link rel="alternate" type="text/html" href="https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557969"/>
		<updated>2016-06-07T09:37:13Z</updated>

		<summary type="html">&lt;p&gt;Wh1413: /* ONIOM(B3LYP/6-31G*:B3LYP/STO-3G) */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;=Diels-Alder Cycloaddition of Quinodimethane to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 quino TS.gif.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the Diels-Alder&amp;lt;br/&amp;gt;cycloaddition of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the Diels-Alder&amp;lt;br/&amp;gt;cycloaddition of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=1,3-dipolar Cycloaddition of Ozone to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS a.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT at the C1-C2 bond, calculated&amp;lt;br/&amp;gt;using ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the 1,3-dipolar&amp;lt;br/&amp;gt;cycloaddition of ozone to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS d.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT at the C2-C3 bond, calculated&amp;lt;br/&amp;gt;using ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the 1,3-dipolar&amp;lt;br/&amp;gt;cycloaddition of ozone to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=[2+1]-Cycloaddition of Dichlorocarbene to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene aPM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 carbene TS.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of dichlorocarbene to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene s aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of dichlorocarbene to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=[4+2]-Cycloaddition of Benzyne to (10,0)-SWCNT=&lt;br /&gt;
==Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:B3LYP/STO-3G)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene aPM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 carbene TS.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the [4+2]-cycloaddition&amp;lt;br/&amp;gt;of benzyne to (10,0)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:B3LYP/STO-3G). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the [4+2]-cycloaddition&amp;lt;br/&amp;gt;of benzyne to (10,0)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:B3LYP/STO-3G).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:B3LYP/STO-3G)===&lt;/div&gt;</summary>
		<author><name>Wh1413</name></author>
	</entry>
	<entry>
		<id>https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557968</id>
		<title>Functionalisation of Carbon Nanotube Sidewalls by Cycloaddition Reactions:Computationally Investigating ONIOM Method Combinations</title>
		<link rel="alternate" type="text/html" href="https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557968"/>
		<updated>2016-06-07T09:36:37Z</updated>

		<summary type="html">&lt;p&gt;Wh1413: /* ONIOM(B3LYP/6-31G*:B3LYP/STO-3G) */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;=Diels-Alder Cycloaddition of Quinodimethane to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 quino TS.gif.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the Diels-Alder&amp;lt;br/&amp;gt;cycloaddition of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the Diels-Alder&amp;lt;br/&amp;gt;cycloaddition of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=1,3-dipolar Cycloaddition of Ozone to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS a.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT at the C1-C2 bond, calculated&amp;lt;br/&amp;gt;using ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the 1,3-dipolar&amp;lt;br/&amp;gt;cycloaddition of ozone to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS d.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT at the C2-C3 bond, calculated&amp;lt;br/&amp;gt;using ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the 1,3-dipolar&amp;lt;br/&amp;gt;cycloaddition of ozone to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=[2+1]-Cycloaddition of Dichlorocarbene to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene aPM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 carbene TS.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of dichlorocarbene to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene s aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of dichlorocarbene to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=[4+2]-Cycloaddition of Benzyne to (10,0)-SWCNT=&lt;br /&gt;
==Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:B3LYP/STO-3G)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene aPM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 carbene TS.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the [4+2]-cycloaddition&amp;lt;br/&amp;gt;of benzyne to (10,0)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:B3LYP/STO-3G). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the [4+2]-cycloaddition&amp;lt;br/&amp;gt;of benzyne to (10,0)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:B3LYP/STO-3G).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;/div&gt;</summary>
		<author><name>Wh1413</name></author>
	</entry>
	<entry>
		<id>https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557967</id>
		<title>Functionalisation of Carbon Nanotube Sidewalls by Cycloaddition Reactions:Computationally Investigating ONIOM Method Combinations</title>
		<link rel="alternate" type="text/html" href="https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557967"/>
		<updated>2016-06-07T09:35:54Z</updated>

		<summary type="html">&lt;p&gt;Wh1413: /* ONIOM(B3LYP/6-31G*:B3LYP/STO-3G) */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;=Diels-Alder Cycloaddition of Quinodimethane to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 quino TS.gif.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the Diels-Alder&amp;lt;br/&amp;gt;cycloaddition of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the Diels-Alder&amp;lt;br/&amp;gt;cycloaddition of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=1,3-dipolar Cycloaddition of Ozone to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS a.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT at the C1-C2 bond, calculated&amp;lt;br/&amp;gt;using ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the 1,3-dipolar&amp;lt;br/&amp;gt;cycloaddition of ozone to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS d.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT at the C2-C3 bond, calculated&amp;lt;br/&amp;gt;using ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the 1,3-dipolar&amp;lt;br/&amp;gt;cycloaddition of ozone to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=[2+1]-Cycloaddition of Dichlorocarbene to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene aPM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 carbene TS.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of dichlorocarbene to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene s aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of dichlorocarbene to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=[4+2]-Cycloaddition of Benzyne to (10,0)-SWCNT=&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:B3LYP/STO-3G)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene aPM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 carbene TS.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the [4+2]-cycloaddition&amp;lt;br/&amp;gt;of benzyne to (10,0)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:B3LYP/STO-3G). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the [4+2]-cycloaddition&amp;lt;br/&amp;gt;of benzyne to (10,0)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:B3LYP/STO-3G).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;/div&gt;</summary>
		<author><name>Wh1413</name></author>
	</entry>
	<entry>
		<id>https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557966</id>
		<title>Functionalisation of Carbon Nanotube Sidewalls by Cycloaddition Reactions:Computationally Investigating ONIOM Method Combinations</title>
		<link rel="alternate" type="text/html" href="https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557966"/>
		<updated>2016-06-07T09:34:17Z</updated>

		<summary type="html">&lt;p&gt;Wh1413: /* ONIOM(B3LYP/6-31G*:PM3) */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;=Diels-Alder Cycloaddition of Quinodimethane to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 quino TS.gif.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the Diels-Alder&amp;lt;br/&amp;gt;cycloaddition of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the Diels-Alder&amp;lt;br/&amp;gt;cycloaddition of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=1,3-dipolar Cycloaddition of Ozone to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS a.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT at the C1-C2 bond, calculated&amp;lt;br/&amp;gt;using ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the 1,3-dipolar&amp;lt;br/&amp;gt;cycloaddition of ozone to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS d.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT at the C2-C3 bond, calculated&amp;lt;br/&amp;gt;using ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the 1,3-dipolar&amp;lt;br/&amp;gt;cycloaddition of ozone to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=[2+1]-Cycloaddition of Dichlorocarbene to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene aPM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 carbene TS.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of dichlorocarbene to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene s aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of dichlorocarbene to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=[4+2]-Cycloaddition of Benzyne to (10,0)-SWCNT=&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:B3LYP/STO-3G)===&lt;/div&gt;</summary>
		<author><name>Wh1413</name></author>
	</entry>
	<entry>
		<id>https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557965</id>
		<title>Functionalisation of Carbon Nanotube Sidewalls by Cycloaddition Reactions:Computationally Investigating ONIOM Method Combinations</title>
		<link rel="alternate" type="text/html" href="https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557965"/>
		<updated>2016-06-07T09:33:57Z</updated>

		<summary type="html">&lt;p&gt;Wh1413: /* ONIOM(B3LYP/6-31G*:PM3) */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;=Diels-Alder Cycloaddition of Quinodimethane to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 quino TS.gif.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the Diels-Alder&amp;lt;br/&amp;gt;cycloaddition of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the Diels-Alder&amp;lt;br/&amp;gt;cycloaddition of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=1,3-dipolar Cycloaddition of Ozone to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS a.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT at the C1-C2 bond, calculated&amp;lt;br/&amp;gt;using ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the 1,3-dipolar&amp;lt;br/&amp;gt;cycloaddition of ozone to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS d.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT at the C2-C3 bond, calculated&amp;lt;br/&amp;gt;using ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the 1,3-dipolar&amp;lt;br/&amp;gt;cycloaddition of ozone to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=[2+1]-Cycloaddition of Dichlorocarbene to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene aPM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 carbene TS.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of dichlorocarbene to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene s aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of dichlorocarbene to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=[4+2]-Cycloaddition of Benzyne to (10,0)-SWCNT=&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:B3LYP/STO-3G)===&lt;/div&gt;</summary>
		<author><name>Wh1413</name></author>
	</entry>
	<entry>
		<id>https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557964</id>
		<title>Functionalisation of Carbon Nanotube Sidewalls by Cycloaddition Reactions:Computationally Investigating ONIOM Method Combinations</title>
		<link rel="alternate" type="text/html" href="https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557964"/>
		<updated>2016-06-07T09:33:42Z</updated>

		<summary type="html">&lt;p&gt;Wh1413: /* ONIOM(B3LYP/6-31G*:PM3) */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;=Diels-Alder Cycloaddition of Quinodimethane to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 quino TS.gif.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the Diels-Alder&amp;lt;br/&amp;gt;cycloaddition of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the Diels-Alder&amp;lt;br/&amp;gt;cycloaddition of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=1,3-dipolar Cycloaddition of Ozone to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS a.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT at the C1-C2 bond, calculated&amp;lt;br/&amp;gt;using ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the 1,3-dipolar&amp;lt;br/&amp;gt;cycloaddition of ozone to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS d.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT at the C2-C3 bond, calculated&amp;lt;br/&amp;gt;using ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the 1,3-dipolar&amp;lt;br/&amp;gt;cycloaddition of ozone to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=[2+1]-Cycloaddition of Dichlorocarbene to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene aPM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 carbene TS.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of dichlorocarbene to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene s aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of dichlorocarbene to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=[4+2]-Cycloaddition of Benzyne to (10,0)-SWCNT=&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:B3LYP/STO-3G)===&lt;/div&gt;</summary>
		<author><name>Wh1413</name></author>
	</entry>
	<entry>
		<id>https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557963</id>
		<title>Functionalisation of Carbon Nanotube Sidewalls by Cycloaddition Reactions:Computationally Investigating ONIOM Method Combinations</title>
		<link rel="alternate" type="text/html" href="https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557963"/>
		<updated>2016-06-07T09:32:52Z</updated>

		<summary type="html">&lt;p&gt;Wh1413: /* ONIOM(B3LYP/6-31G*:PM3) */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;=Diels-Alder Cycloaddition of Quinodimethane to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 quino TS.gif.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the Diels-Alder&amp;lt;br/&amp;gt;cycloaddition of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the Diels-Alder&amp;lt;br/&amp;gt;cycloaddition of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=1,3-dipolar Cycloaddition of Ozone to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS a.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT at the C1-C2 bond, calculated&amp;lt;br/&amp;gt;using ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the 1,3-dipolar&amp;lt;br/&amp;gt;cycloaddition of ozone to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS d.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT at the C2-C3 bond, calculated&amp;lt;br/&amp;gt;using ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the 1,3-dipolar&amp;lt;br/&amp;gt;cycloaddition of ozone to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=[2+1]-Cycloaddition of Dichlorocarbene to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene aPM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 carbene TS.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of dichlorocarbene to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene s aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of dichlorocarbene to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=[4+2]-Cycloaddition of Benzyne to (10,0)-SWCNT=&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:B3LYP/STO-3G)===&lt;/div&gt;</summary>
		<author><name>Wh1413</name></author>
	</entry>
	<entry>
		<id>https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557962</id>
		<title>Functionalisation of Carbon Nanotube Sidewalls by Cycloaddition Reactions:Computationally Investigating ONIOM Method Combinations</title>
		<link rel="alternate" type="text/html" href="https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557962"/>
		<updated>2016-06-07T09:32:19Z</updated>

		<summary type="html">&lt;p&gt;Wh1413: /* ONIOM(B3LYP/6-31G*:PM3) */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;=Diels-Alder Cycloaddition of Quinodimethane to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 quino TS.gif.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the Diels-Alder&amp;lt;br/&amp;gt;cycloaddition of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the Diels-Alder&amp;lt;br/&amp;gt;cycloaddition of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=1,3-dipolar Cycloaddition of Ozone to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS a.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT at the C1-C2 bond, calculated&amp;lt;br/&amp;gt;using ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the 1,3-dipolar&amp;lt;br/&amp;gt;cycloaddition of ozone to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS d.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT at the C2-C3 bond, calculated&amp;lt;br/&amp;gt;using ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the 1,3-dipolar&amp;lt;br/&amp;gt;cycloaddition of ozone to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=[2+1]-Cycloaddition of Dichlorocarbene to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene aPM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 carbene TS.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of dichlorocarbene to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene s aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of dichlorocarbene to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=[4+2]-Cycloaddition of Benzyne to (10,0)-SWCNT=&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:B3LYP/STO-3G)===&lt;/div&gt;</summary>
		<author><name>Wh1413</name></author>
	</entry>
	<entry>
		<id>https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557961</id>
		<title>Functionalisation of Carbon Nanotube Sidewalls by Cycloaddition Reactions:Computationally Investigating ONIOM Method Combinations</title>
		<link rel="alternate" type="text/html" href="https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557961"/>
		<updated>2016-06-07T09:31:42Z</updated>

		<summary type="html">&lt;p&gt;Wh1413: /* ONIOM(B3LYP/6-31G*:PM3) */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;=Diels-Alder Cycloaddition of Quinodimethane to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 quino TS.gif.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the Diels-Alder&amp;lt;br/&amp;gt;cycloaddition of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the Diels-Alder&amp;lt;br/&amp;gt;cycloaddition of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=1,3-dipolar Cycloaddition of Ozone to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS a.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT at the C1-C2 bond, calculated&amp;lt;br/&amp;gt;using ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the 1,3-dipolar&amp;lt;br/&amp;gt;cycloaddition of ozone to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS d.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT at the C2-C3 bond, calculated&amp;lt;br/&amp;gt;using ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the 1,3-dipolar&amp;lt;br/&amp;gt;cycloaddition of ozone to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=[2+1]-Cycloaddition of Dichlorocarbene to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene aPM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 carbene TS.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of dichlorocarbene to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene s aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of dichlorocarbene to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=[4+2]-Cycloaddition of Benzyne to (10,0)-SWCNT=&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:B3LYP/STO-3G)===&lt;/div&gt;</summary>
		<author><name>Wh1413</name></author>
	</entry>
	<entry>
		<id>https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557960</id>
		<title>Functionalisation of Carbon Nanotube Sidewalls by Cycloaddition Reactions:Computationally Investigating ONIOM Method Combinations</title>
		<link rel="alternate" type="text/html" href="https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557960"/>
		<updated>2016-06-07T09:31:05Z</updated>

		<summary type="html">&lt;p&gt;Wh1413: /* ONIOM(B3LYP/6-31G*:PM3) */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;=Diels-Alder Cycloaddition of Quinodimethane to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 quino TS.gif.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the Diels-Alder&amp;lt;br/&amp;gt;cycloaddition of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol product structure of the Diels-Alder&amp;lt;br/&amp;gt;cycloaddition of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=1,3-dipolar Cycloaddition of Ozone to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS a.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT at the C1-C2 bond, calculated&amp;lt;br/&amp;gt;using ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the 1,3-dipolar&amp;lt;br/&amp;gt;cycloaddition of ozone to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS d.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT at the C2-C3 bond, calculated&amp;lt;br/&amp;gt;using ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the 1,3-dipolar&amp;lt;br/&amp;gt;cycloaddition of ozone to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=[2+1]-Cycloaddition of Dichlorocarbene to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene aPM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 carbene TS.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of dichlorocarbene to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene s aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of dichlorocarbene to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=[4+2]-Cycloaddition of Benzyne to (10,0)-SWCNT=&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:B3LYP/STO-3G)===&lt;/div&gt;</summary>
		<author><name>Wh1413</name></author>
	</entry>
	<entry>
		<id>https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557959</id>
		<title>Functionalisation of Carbon Nanotube Sidewalls by Cycloaddition Reactions:Computationally Investigating ONIOM Method Combinations</title>
		<link rel="alternate" type="text/html" href="https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557959"/>
		<updated>2016-06-07T09:28:33Z</updated>

		<summary type="html">&lt;p&gt;Wh1413: /* ONIOM(B3LYP/6-31G*:PM3) */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;=Diels-Alder Cycloaddition of Quinodimethane to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 quino TS.gif.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the Diels-Alder&amp;lt;br/&amp;gt;cycloaddition of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=1,3-dipolar Cycloaddition of Ozone to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS a.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT at the C1-C2 bond, calculated&amp;lt;br/&amp;gt;using ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the 1,3-dipolar&amp;lt;br/&amp;gt;cycloaddition of ozone to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS d.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT at the C2-C3 bond, calculated&amp;lt;br/&amp;gt;using ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the 1,3-dipolar&amp;lt;br/&amp;gt;cycloaddition of ozone to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=[2+1]-Cycloaddition of Dichlorocarbene to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene aPM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 carbene TS.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of dichlorocarbene to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene s aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of dichlorocarbene to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=[4+2]-Cycloaddition of Benzyne to (10,0)-SWCNT=&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:B3LYP/STO-3G)===&lt;/div&gt;</summary>
		<author><name>Wh1413</name></author>
	</entry>
	<entry>
		<id>https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557958</id>
		<title>Functionalisation of Carbon Nanotube Sidewalls by Cycloaddition Reactions:Computationally Investigating ONIOM Method Combinations</title>
		<link rel="alternate" type="text/html" href="https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557958"/>
		<updated>2016-06-07T09:27:59Z</updated>

		<summary type="html">&lt;p&gt;Wh1413: /* ONIOM(B3LYP/6-31G*:PM3) */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;=Diels-Alder Cycloaddition of Quinodimethane to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 quino TS.gif.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the Diels-Alder&amp;lt;br/&amp;gt;cycloaddition of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=1,3-dipolar Cycloaddition of Ozone to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS a.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT at the C1-C2 bond, calculated&amp;lt;br/&amp;gt;using ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the 1,3-dipolar&amp;lt;br/&amp;gt;cycloaddition of ozone to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS d.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT at the C2-C3 bond, calculated&amp;lt;br/&amp;gt;using ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the 1,3-dipolar&amp;lt;br/&amp;gt;cycloaddition of ozone to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=[2+1]-Cycloaddition of Dichlorocarbene to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene aPM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 carbene TS.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of dichlorocarbene to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene s aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=[4+2]-Cycloaddition of Benzyne to (10,0)-SWCNT=&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:B3LYP/STO-3G)===&lt;/div&gt;</summary>
		<author><name>Wh1413</name></author>
	</entry>
	<entry>
		<id>https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557957</id>
		<title>Functionalisation of Carbon Nanotube Sidewalls by Cycloaddition Reactions:Computationally Investigating ONIOM Method Combinations</title>
		<link rel="alternate" type="text/html" href="https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557957"/>
		<updated>2016-06-07T09:27:27Z</updated>

		<summary type="html">&lt;p&gt;Wh1413: /* ONIOM(B3LYP/6-31G*:PM3) */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;=Diels-Alder Cycloaddition of Quinodimethane to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 quino TS.gif.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the Diels-Alder&amp;lt;br/&amp;gt;cycloaddition of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=1,3-dipolar Cycloaddition of Ozone to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS a.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT at the C1-C2 bond, calculated&amp;lt;br/&amp;gt;using ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the 1,3-dipolar&amp;lt;br/&amp;gt;cycloaddition of ozone to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS d.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT at the C2-C3 bond, calculated&amp;lt;br/&amp;gt;using ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the 1,3-dipolar&amp;lt;br/&amp;gt;cycloaddition of ozone to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=[2+1]-Cycloaddition of Dichlorocarbene to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene aPM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 carbene TS.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of dichlorocarbene to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene s aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=[4+2]-Cycloaddition of Benzyne to (10,0)-SWCNT=&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:B3LYP/STO-3G)===&lt;/div&gt;</summary>
		<author><name>Wh1413</name></author>
	</entry>
	<entry>
		<id>https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557956</id>
		<title>Functionalisation of Carbon Nanotube Sidewalls by Cycloaddition Reactions:Computationally Investigating ONIOM Method Combinations</title>
		<link rel="alternate" type="text/html" href="https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557956"/>
		<updated>2016-06-07T09:27:04Z</updated>

		<summary type="html">&lt;p&gt;Wh1413: /* ONIOM(B3LYP/6-31G*:PM3) */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;=Diels-Alder Cycloaddition of Quinodimethane to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 quino TS.gif.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the Diels-Alder&amp;lt;br/&amp;gt;cycloaddition of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=1,3-dipolar Cycloaddition of Ozone to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS a.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT at the C1-C2 bond, calculated&amp;lt;br/&amp;gt;using ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the 1,3-dipolar&amp;lt;br/&amp;gt;cycloaddition of ozone to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS d.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT at the C2-C3 bond, calculated&amp;lt;br/&amp;gt;using ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the 1,3-dipolar&amp;lt;br/&amp;gt;cycloaddition of ozone to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=[2+1]-Cycloaddition of Dichlorocarbene to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene aPM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 carbene TS.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of dichlorocarbene to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene s aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=[4+2]-Cycloaddition of Benzyne to (10,0)-SWCNT=&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:B3LYP/STO-3G)===&lt;/div&gt;</summary>
		<author><name>Wh1413</name></author>
	</entry>
	<entry>
		<id>https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557955</id>
		<title>Functionalisation of Carbon Nanotube Sidewalls by Cycloaddition Reactions:Computationally Investigating ONIOM Method Combinations</title>
		<link rel="alternate" type="text/html" href="https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557955"/>
		<updated>2016-06-07T09:26:15Z</updated>

		<summary type="html">&lt;p&gt;Wh1413: /* ONIOM(B3LYP/6-31G*:PM3) */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;=Diels-Alder Cycloaddition of Quinodimethane to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 quino TS.gif.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the Diels-Alder&amp;lt;br/&amp;gt;cycloaddition of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Product structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=1,3-dipolar Cycloaddition of Ozone to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS a.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT at the C1-C2 bond, calculated&amp;lt;br/&amp;gt;using ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the 1,3-dipolar&amp;lt;br/&amp;gt;cycloaddition of ozone to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS d.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT at the C2-C3 bond, calculated&amp;lt;br/&amp;gt;using ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the 1,3-dipolar&amp;lt;br/&amp;gt;cycloaddition of ozone to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=[2+1]-Cycloaddition of Dichlorocarbene to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene aPM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 carbene TS.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of dichlorocarbene to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene s aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=[4+2]-Cycloaddition of Benzyne to (10,0)-SWCNT=&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:B3LYP/STO-3G)===&lt;/div&gt;</summary>
		<author><name>Wh1413</name></author>
	</entry>
	<entry>
		<id>https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557954</id>
		<title>Functionalisation of Carbon Nanotube Sidewalls by Cycloaddition Reactions:Computationally Investigating ONIOM Method Combinations</title>
		<link rel="alternate" type="text/html" href="https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557954"/>
		<updated>2016-06-07T09:25:25Z</updated>

		<summary type="html">&lt;p&gt;Wh1413: /* ONIOM(B3LYP/6-31G*:PM3) */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;=Diels-Alder Cycloaddition of Quinodimethane to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 quino TS.gif.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the Diels-Alder&amp;lt;br/&amp;gt;cycloaddition of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=1,3-dipolar Cycloaddition of Ozone to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS a.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT at the C1-C2 bond, calculated&amp;lt;br/&amp;gt;using ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the 1,3-dipolar&amp;lt;br/&amp;gt;cycloaddition of ozone to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS d.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT at the C2-C3 bond, calculated&amp;lt;br/&amp;gt;using ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the 1,3-dipolar&amp;lt;br/&amp;gt;cycloaddition of ozone to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=[2+1]-Cycloaddition of Dichlorocarbene to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene aPM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 carbene TS.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of dichlorocarbene to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene s aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=[4+2]-Cycloaddition of Benzyne to (10,0)-SWCNT=&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:B3LYP/STO-3G)===&lt;/div&gt;</summary>
		<author><name>Wh1413</name></author>
	</entry>
	<entry>
		<id>https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557953</id>
		<title>Functionalisation of Carbon Nanotube Sidewalls by Cycloaddition Reactions:Computationally Investigating ONIOM Method Combinations</title>
		<link rel="alternate" type="text/html" href="https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557953"/>
		<updated>2016-06-07T09:24:22Z</updated>

		<summary type="html">&lt;p&gt;Wh1413: /* ONIOM(B3LYP/6-31G*:PM3) */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;=Diels-Alder Cycloaddition of Quinodimethane to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 quino TS.gif.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the Diels-Alder&amp;lt;br/&amp;gt;cycloaddition of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=1,3-dipolar Cycloaddition of Ozone to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS a.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT at the C1-C2 bond, calculated&amp;lt;br/&amp;gt;using ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the 1,3-dipolar&amp;lt;br/&amp;gt;cycloaddition of ozone to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS d.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT at the C2-C3 bond, calculated&amp;lt;br/&amp;gt;using ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the 1,3-dipolar&amp;lt;br/&amp;gt;cycloaddition of ozone to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=[2+1]-Cycloaddition of Dichlorocarbene to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene aPM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 carbene TS.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of dichlorocarbene to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the Diels-Alder&amp;lt;br/&amp;gt;cycloaddition of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene s aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=[4+2]-Cycloaddition of Benzyne to (10,0)-SWCNT=&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:B3LYP/STO-3G)===&lt;/div&gt;</summary>
		<author><name>Wh1413</name></author>
	</entry>
	<entry>
		<id>https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557952</id>
		<title>Functionalisation of Carbon Nanotube Sidewalls by Cycloaddition Reactions:Computationally Investigating ONIOM Method Combinations</title>
		<link rel="alternate" type="text/html" href="https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557952"/>
		<updated>2016-06-07T09:23:23Z</updated>

		<summary type="html">&lt;p&gt;Wh1413: /* ONIOM(B3LYP/6-31G*:PM3) */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;=Diels-Alder Cycloaddition of Quinodimethane to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 quino TS.gif.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the Diels-Alder&amp;lt;br/&amp;gt;cycloaddition of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=1,3-dipolar Cycloaddition of Ozone to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS a.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT at the C1-C2 bond, calculated&amp;lt;br/&amp;gt;using ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the 1,3-dipolar&amp;lt;br/&amp;gt;cycloaddition of ozone to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS d.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT at the C2-C3 bond, calculated&amp;lt;br/&amp;gt;using ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=[2+1]-Cycloaddition of Dichlorocarbene to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene aPM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 carbene TS.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the [2+1]-cycloaddition&amp;lt;br/&amp;gt;of dichlorocarbene to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the Diels-Alder&amp;lt;br/&amp;gt;cycloaddition of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene s aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=[4+2]-Cycloaddition of Benzyne to (10,0)-SWCNT=&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:B3LYP/STO-3G)===&lt;/div&gt;</summary>
		<author><name>Wh1413</name></author>
	</entry>
	<entry>
		<id>https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557951</id>
		<title>Functionalisation of Carbon Nanotube Sidewalls by Cycloaddition Reactions:Computationally Investigating ONIOM Method Combinations</title>
		<link rel="alternate" type="text/html" href="https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557951"/>
		<updated>2016-06-07T09:22:28Z</updated>

		<summary type="html">&lt;p&gt;Wh1413: /* ONIOM(B3LYP/6-31G*:PM3) */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;=Diels-Alder Cycloaddition of Quinodimethane to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 quino TS.gif.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the Diels-Alder&amp;lt;br/&amp;gt;cycloaddition of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=1,3-dipolar Cycloaddition of Ozone to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS a.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT at the C1-C2 bond, calculated&amp;lt;br/&amp;gt;using ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the 1,3-dipolar&amp;lt;br/&amp;gt;cycloaddition of ozone to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS d.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT at the C2-C3 bond, calculated&amp;lt;br/&amp;gt;using ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=[2+1]-Cycloaddition of Dichlorocarbene to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene aPM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 carbene TS.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the Diels-Alder&amp;lt;br/&amp;gt;cycloaddition of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene s aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=[4+2]-Cycloaddition of Benzyne to (10,0)-SWCNT=&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:B3LYP/STO-3G)===&lt;/div&gt;</summary>
		<author><name>Wh1413</name></author>
	</entry>
	<entry>
		<id>https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557950</id>
		<title>Functionalisation of Carbon Nanotube Sidewalls by Cycloaddition Reactions:Computationally Investigating ONIOM Method Combinations</title>
		<link rel="alternate" type="text/html" href="https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557950"/>
		<updated>2016-06-07T09:21:33Z</updated>

		<summary type="html">&lt;p&gt;Wh1413: /* ONIOM(B3LYP/6-31G*:PM3) */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;=Diels-Alder Cycloaddition of Quinodimethane to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 quino TS.gif.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the Diels-Alder&amp;lt;br/&amp;gt;cycloaddition of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=1,3-dipolar Cycloaddition of Ozone to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS a.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT at the C1-C2 bond, calculated&amp;lt;br/&amp;gt;using ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the 1,3-dipolar&amp;lt;br/&amp;gt;cycloaddition of ozone to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS d.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=[2+1]-Cycloaddition of Dichlorocarbene to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene aPM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 carbene TS.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the Diels-Alder&amp;lt;br/&amp;gt;cycloaddition of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene s aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=[4+2]-Cycloaddition of Benzyne to (10,0)-SWCNT=&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:B3LYP/STO-3G)===&lt;/div&gt;</summary>
		<author><name>Wh1413</name></author>
	</entry>
	<entry>
		<id>https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557949</id>
		<title>Functionalisation of Carbon Nanotube Sidewalls by Cycloaddition Reactions:Computationally Investigating ONIOM Method Combinations</title>
		<link rel="alternate" type="text/html" href="https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557949"/>
		<updated>2016-06-07T09:20:36Z</updated>

		<summary type="html">&lt;p&gt;Wh1413: /* ONIOM(B3LYP/6-31G*:PM3) */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;=Diels-Alder Cycloaddition of Quinodimethane to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 quino TS.gif.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the Diels-Alder&amp;lt;br/&amp;gt;cycloaddition of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=1,3-dipolar Cycloaddition of Ozone to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS a.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT at the C1-C2 bond, calculated&amp;lt;br/&amp;gt;using ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS d.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=[2+1]-Cycloaddition of Dichlorocarbene to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene aPM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 carbene TS.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the Diels-Alder&amp;lt;br/&amp;gt;cycloaddition of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene s aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=[4+2]-Cycloaddition of Benzyne to (10,0)-SWCNT=&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:B3LYP/STO-3G)===&lt;/div&gt;</summary>
		<author><name>Wh1413</name></author>
	</entry>
	<entry>
		<id>https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557948</id>
		<title>Functionalisation of Carbon Nanotube Sidewalls by Cycloaddition Reactions:Computationally Investigating ONIOM Method Combinations</title>
		<link rel="alternate" type="text/html" href="https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557948"/>
		<updated>2016-06-07T09:20:09Z</updated>

		<summary type="html">&lt;p&gt;Wh1413: /* ONIOM(B3LYP/6-31G*:PM3) */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;=Diels-Alder Cycloaddition of Quinodimethane to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 quino TS.gif.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the Diels-Alder&amp;lt;br/&amp;gt;cycloaddition of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=1,3-dipolar Cycloaddition of Ozone to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS a.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the 1,3-dipolar cycloaddition&amp;lt;br/&amp;gt;of ozone to (5,5)-SWCNT at the C1-C2 bond, calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS d.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=[2+1]-Cycloaddition of Dichlorocarbene to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene aPM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 carbene TS.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the Diels-Alder&amp;lt;br/&amp;gt;cycloaddition of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene s aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=[4+2]-Cycloaddition of Benzyne to (10,0)-SWCNT=&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:B3LYP/STO-3G)===&lt;/div&gt;</summary>
		<author><name>Wh1413</name></author>
	</entry>
	<entry>
		<id>https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557947</id>
		<title>Functionalisation of Carbon Nanotube Sidewalls by Cycloaddition Reactions:Computationally Investigating ONIOM Method Combinations</title>
		<link rel="alternate" type="text/html" href="https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557947"/>
		<updated>2016-06-07T09:19:14Z</updated>

		<summary type="html">&lt;p&gt;Wh1413: /* ONIOM(B3LYP/6-31G*:PM3) */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;=Diels-Alder Cycloaddition of Quinodimethane to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 quino TS.gif.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the Diels-Alder&amp;lt;br/&amp;gt;cycloaddition of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Single imaginary frequency at jjjjjj cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=1,3-dipolar Cycloaddition of Ozone to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS a.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS d.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=[2+1]-Cycloaddition of Dichlorocarbene to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene aPM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 carbene TS.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the Diels-Alder&amp;lt;br/&amp;gt;cycloaddition of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene s aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=[4+2]-Cycloaddition of Benzyne to (10,0)-SWCNT=&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:B3LYP/STO-3G)===&lt;/div&gt;</summary>
		<author><name>Wh1413</name></author>
	</entry>
	<entry>
		<id>https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557946</id>
		<title>Functionalisation of Carbon Nanotube Sidewalls by Cycloaddition Reactions:Computationally Investigating ONIOM Method Combinations</title>
		<link rel="alternate" type="text/html" href="https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557946"/>
		<updated>2016-06-06T10:02:42Z</updated>

		<summary type="html">&lt;p&gt;Wh1413: /* [4+2]-Cycloaddition of Benzyne to (10,0)-SWCNT */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;=Diels-Alder Cycloaddition of Quinodimethane to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 quino TS.gif.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the Diels-Alder&amp;lt;br/&amp;gt;cycloaddition of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=1,3-dipolar Cycloaddition of Ozone to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS a.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS d.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=[2+1]-Cycloaddition of Dichlorocarbene to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene aPM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 carbene TS.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the Diels-Alder&amp;lt;br/&amp;gt;cycloaddition of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene s aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=[4+2]-Cycloaddition of Benzyne to (10,0)-SWCNT=&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:B3LYP/STO-3G)===&lt;/div&gt;</summary>
		<author><name>Wh1413</name></author>
	</entry>
	<entry>
		<id>https://chemwiki.ch.ic.ac.uk/index.php?title=File:PM3_carbene_prod.png&amp;diff=557945</id>
		<title>File:PM3 carbene prod.png</title>
		<link rel="alternate" type="text/html" href="https://chemwiki.ch.ic.ac.uk/index.php?title=File:PM3_carbene_prod.png&amp;diff=557945"/>
		<updated>2016-06-06T09:58:59Z</updated>

		<summary type="html">&lt;p&gt;Wh1413: Wh1413 uploaded a new version of File:PM3 carbene prod.png&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;&lt;/div&gt;</summary>
		<author><name>Wh1413</name></author>
	</entry>
	<entry>
		<id>https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557944</id>
		<title>Functionalisation of Carbon Nanotube Sidewalls by Cycloaddition Reactions:Computationally Investigating ONIOM Method Combinations</title>
		<link rel="alternate" type="text/html" href="https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557944"/>
		<updated>2016-06-06T09:55:00Z</updated>

		<summary type="html">&lt;p&gt;Wh1413: /* ONIOM(B3LYP/6-31G*:PM3) */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;=Diels-Alder Cycloaddition of Quinodimethane to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 quino TS.gif.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the Diels-Alder&amp;lt;br/&amp;gt;cycloaddition of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=1,3-dipolar Cycloaddition of Ozone to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS a.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS d.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=[2+1]-Cycloaddition of Dichlorocarbene to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene aPM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 carbene TS.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the Diels-Alder&amp;lt;br/&amp;gt;cycloaddition of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene s aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=[4+2]-Cycloaddition of Benzyne to (10,0)-SWCNT=&lt;/div&gt;</summary>
		<author><name>Wh1413</name></author>
	</entry>
	<entry>
		<id>https://chemwiki.ch.ic.ac.uk/index.php?title=File:PM3_carbene_prod.png&amp;diff=557943</id>
		<title>File:PM3 carbene prod.png</title>
		<link rel="alternate" type="text/html" href="https://chemwiki.ch.ic.ac.uk/index.php?title=File:PM3_carbene_prod.png&amp;diff=557943"/>
		<updated>2016-06-06T09:54:20Z</updated>

		<summary type="html">&lt;p&gt;Wh1413: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;&lt;/div&gt;</summary>
		<author><name>Wh1413</name></author>
	</entry>
	<entry>
		<id>https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557942</id>
		<title>Functionalisation of Carbon Nanotube Sidewalls by Cycloaddition Reactions:Computationally Investigating ONIOM Method Combinations</title>
		<link rel="alternate" type="text/html" href="https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557942"/>
		<updated>2016-06-06T09:36:25Z</updated>

		<summary type="html">&lt;p&gt;Wh1413: /* ONIOM(B3LYP/6-31G*:PM3) */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;=Diels-Alder Cycloaddition of Quinodimethane to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 quino TS.gif.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the Diels-Alder&amp;lt;br/&amp;gt;cycloaddition of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=1,3-dipolar Cycloaddition of Ozone to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS a.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS d.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=[2+1]-Cycloaddition of Dichlorocarbene to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene aPM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 carbene TS.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the Diels-Alder&amp;lt;br/&amp;gt;cycloaddition of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene s aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=[4+2]-Cycloaddition of Benzyne to (10,0)-SWCNT=&lt;/div&gt;</summary>
		<author><name>Wh1413</name></author>
	</entry>
	<entry>
		<id>https://chemwiki.ch.ic.ac.uk/index.php?title=File:Carbene_s_aprod_PM3.pdb&amp;diff=557941</id>
		<title>File:Carbene s aprod PM3.pdb</title>
		<link rel="alternate" type="text/html" href="https://chemwiki.ch.ic.ac.uk/index.php?title=File:Carbene_s_aprod_PM3.pdb&amp;diff=557941"/>
		<updated>2016-06-06T09:35:41Z</updated>

		<summary type="html">&lt;p&gt;Wh1413: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;&lt;/div&gt;</summary>
		<author><name>Wh1413</name></author>
	</entry>
	<entry>
		<id>https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557940</id>
		<title>Functionalisation of Carbon Nanotube Sidewalls by Cycloaddition Reactions:Computationally Investigating ONIOM Method Combinations</title>
		<link rel="alternate" type="text/html" href="https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557940"/>
		<updated>2016-06-06T09:26:40Z</updated>

		<summary type="html">&lt;p&gt;Wh1413: /* ONIOM(B3LYP/6-31G*:PM3) */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;=Diels-Alder Cycloaddition of Quinodimethane to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 quino TS.gif.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the Diels-Alder&amp;lt;br/&amp;gt;cycloaddition of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=1,3-dipolar Cycloaddition of Ozone to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS a.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS d.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=[2+1]-Cycloaddition of Dichlorocarbene to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene aPM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 carbene TS.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the Diels-Alder&amp;lt;br/&amp;gt;cycloaddition of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=[4+2]-Cycloaddition of Benzyne to (10,0)-SWCNT=&lt;/div&gt;</summary>
		<author><name>Wh1413</name></author>
	</entry>
	<entry>
		<id>https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557939</id>
		<title>Functionalisation of Carbon Nanotube Sidewalls by Cycloaddition Reactions:Computationally Investigating ONIOM Method Combinations</title>
		<link rel="alternate" type="text/html" href="https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557939"/>
		<updated>2016-06-06T09:25:55Z</updated>

		<summary type="html">&lt;p&gt;Wh1413: /* ONIOM(B3LYP/6-31G*:PM3) */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;=Diels-Alder Cycloaddition of Quinodimethane to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 quino TS.gif.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the Diels-Alder&amp;lt;br/&amp;gt;cycloaddition of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=1,3-dipolar Cycloaddition of Ozone to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS a.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS d.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=[2+1]-Cycloaddition of Dichlorocarbene to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene aPM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 carbene TS.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the Diels-Alder&amp;lt;br/&amp;gt;cycloaddition of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;/div&gt;</summary>
		<author><name>Wh1413</name></author>
	</entry>
	<entry>
		<id>https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557938</id>
		<title>Functionalisation of Carbon Nanotube Sidewalls by Cycloaddition Reactions:Computationally Investigating ONIOM Method Combinations</title>
		<link rel="alternate" type="text/html" href="https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557938"/>
		<updated>2016-06-06T09:25:22Z</updated>

		<summary type="html">&lt;p&gt;Wh1413: /* ONIOM(B3LYP/6-31G*:PM3) */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;=Diels-Alder Cycloaddition of Quinodimethane to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 quino TS.gif.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the Diels-Alder&amp;lt;br/&amp;gt;cycloaddition of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=1,3-dipolar Cycloaddition of Ozone to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS a.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS d.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=[2+1]-Cycloaddition of Dichlorocarbene to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene aPM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 carbene TS.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the Diels-Alder&amp;lt;br/&amp;gt;cycloaddition of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;/div&gt;</summary>
		<author><name>Wh1413</name></author>
	</entry>
	<entry>
		<id>https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557937</id>
		<title>Functionalisation of Carbon Nanotube Sidewalls by Cycloaddition Reactions:Computationally Investigating ONIOM Method Combinations</title>
		<link rel="alternate" type="text/html" href="https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557937"/>
		<updated>2016-06-06T09:25:03Z</updated>

		<summary type="html">&lt;p&gt;Wh1413: /* ONIOM(B3LYP/6-31G*:PM3) */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;=Diels-Alder Cycloaddition of Quinodimethane to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 quino TS.gif.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the Diels-Alder&amp;lt;br/&amp;gt;cycloaddition of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=1,3-dipolar Cycloaddition of Ozone to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS a.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS d.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=[2+1]-Cycloaddition of Dichlorocarbene to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene aPM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 carbene TS.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the Diels-Alder&amp;lt;br/&amp;gt;cycloaddition of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;/div&gt;</summary>
		<author><name>Wh1413</name></author>
	</entry>
	<entry>
		<id>https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557936</id>
		<title>Functionalisation of Carbon Nanotube Sidewalls by Cycloaddition Reactions:Computationally Investigating ONIOM Method Combinations</title>
		<link rel="alternate" type="text/html" href="https://chemwiki.ch.ic.ac.uk/index.php?title=Functionalisation_of_Carbon_Nanotube_Sidewalls_by_Cycloaddition_Reactions:Computationally_Investigating_ONIOM_Method_Combinations&amp;diff=557936"/>
		<updated>2016-06-06T09:24:27Z</updated>

		<summary type="html">&lt;p&gt;Wh1413: /* ONIOM(B3LYP/6-31G*:PM3) */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;=Diels-Alder Cycloaddition of Quinodimethane to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 quino TS.gif.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the Diels-Alder&amp;lt;br/&amp;gt;cycloaddition of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 quino prod.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Quino aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&amp;lt;br/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=1,3-dipolar Cycloaddition of Ozone to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS a.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz TS d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dTS PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 oz TS d.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod a.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz aprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C2-C3 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 oz prod d.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Oz dprod PM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|Guess TS&lt;br /&gt;
|Imaginary Frequency Vibration at -955.98 cm-1 &amp;lt;br&amp;gt;leading to the Diels-Alder reaction after AM1 &amp;lt;br&amp;gt;optimisation&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
=[2+1]-Cycloaddition of Dichlorocarbene to (5,5)-SWCNT=&lt;br /&gt;
==C1-C2 Transition Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|[[File:PM3 carbene TS.png|300px]]&lt;br /&gt;
|&amp;lt;jmol&amp;gt;&lt;br /&gt;
 &amp;lt;jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;color&amp;gt;#E0FFFF&amp;lt;/color&amp;gt;&amp;lt;size&amp;gt;300&amp;lt;/size&amp;gt;&lt;br /&gt;
   &amp;lt;script&amp;gt;frame 15;vibration 1.5; frank=off&lt;br /&gt;
  &amp;lt;/script&amp;gt;&amp;lt;uploadedFileContents&amp;gt;Carbene aPM3.pdb&amp;lt;/uploadedFileContents&amp;gt;&lt;br /&gt;
 &amp;lt;/jmolApplet&amp;gt;&lt;br /&gt;
&amp;lt;/jmol&amp;gt;&lt;br /&gt;
|[[File:PM3 carbene TS.gif|300px]]&lt;br /&gt;
|-&lt;br /&gt;
|Transition structure of the Diels-Alder cycloaddition&amp;lt;br/&amp;gt;of quinodimethane to (5,5)-SWCNT calculated using&amp;lt;br/&amp;gt;ONIOM(B3LYP/6-31G*:PM3). The high level of theory&amp;lt;br/&amp;gt;is represented as ball and stick, and the wireframe&amp;lt;br/&amp;gt;represents the lower level of theory.&lt;br /&gt;
|Jmol transition structure of the Diels-Alder&amp;lt;br/&amp;gt;cycloaddition of quinodimethane to (5,5)-SWCNT&amp;lt;br/&amp;gt;calculated using ONIOM(B3LYP/6-31G*:PM3).&lt;br /&gt;
|Lowest Real Imaginary Frequency at 147.32 cm-1&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
==C1-C2 Product Structure==&lt;br /&gt;
===ONIOM(B3LYP/6-31G*:PM3)===&lt;/div&gt;</summary>
		<author><name>Wh1413</name></author>
	</entry>
</feed>